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Flowscope Visualization
Leo Maury - Updated Feb. 26, 2020

3D visualization for flowscope Please do not use de 'recovery' version, use the 1.6 version. Example : x slice = 74, y slice = 69, z slice = 53, image*soru.tif* = a, image*sorv.tif* = b, …

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READ IT automated annotation
Guillaume Le-Noe-Bienvenu - Updated Feb. 20, 2020

the NLP tools for the READ-IT project ------ [https://readit-project.eu/](https://readit-project.eu/) [https://read-it.hum.uu.nl/](https://read-it.hum.uu.nl/) ----- Full (updated) documentatio…

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Flowscope
Leo Maury - Updated Dec. 5, 2019

The method is based on variational approach. The data term is derived from 3D Census signature constancy assumption. Quadratic penalizers are used for the data term and the regularizer. SOR iter…

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SVdeconv3D
Leo Maury - Updated Nov. 22, 2019

SVdeconv3D

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allgo api test
Sebastien Letort - Updated Nov. 18, 2019

an app to test api status depending on params.

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HotSpotDetection
Leo Maury - Updated Nov. 7, 2019

The HotSpotDetection software written in C++ enables to detect fluorescence accumulation over time in video-microscopy. The cumulated detection maps enable to extract more reliably the regions of int…

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Cimgdenoising
Leo Maury - Updated Oct. 31, 2019

This app contains : - NDSafir - Sv - Hv

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ND-Safir
Charles Deltel - Updated Oct. 2, 2019

Denoising algorithm for fluorescence

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gatb-pipeline
Charles Deltel - Updated Sept. 25, 2019

GATB-Minia-Pipeline is a de novo assembly pipeline for llumina data. It can assemble genomes and metagenomes. The pipeline consists of: Bloocoo (error correction), Minia (contigs assembly), BESS…

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Concept of nearest neighbors
Nicolas Fouque - Updated Aug. 26, 2019

From an RDF Graph and a text file containing the target nodes, apply the Partitioning Algorithm to find the nearest neighbor https://bitbucket.org/sebferre/conceptsofneighbours/ ###Parameters :##…